A comprehensive analysis of drug resistance molecular markers and Plasmodium falciparum genetic diversity in two malaria endemic sites in Mali.

Drug resistance is one of the greatest challenges of malaria control programme in Mali. Recent advances in next-generation sequencing (NGS) technologies provide new and effective ways of tracking drug-resistant malaria parasites in Africa.

The diversity and the prevalence of Plasmodium falciparum drug-resistance molecular markers were assessed in Dangassa and Nioro-du-Sahel in Mali, two sites with distinct malaria transmission patterns. Dangassa has an intense seasonal malaria transmission, whereas Nioro-du-Sahel has an unstable and short seasonal malaria transmission.

METHODS

Up to 270 dried blood spot samples (214 in Dangassa and 56 in Nioro-du-Sahel) were collected from P. falciparum positive patients in 2016. Samples were analysed on the Agena MassARRAY® iPLEX platform. Specific codons were targeted in Pfcrt, Pfmdr1, Pfdhfr, and Pfdhps, Pfarps10, Pfferredoxin, Pfexonuclease and Pfmdr2 genes. The Sanger’s 101-SNPs-barcode method was used to assess the genetic diversity of P. falciparum and to determine the parasite species.The Pfcrt_76T chloroquine-resistance genotype was found at a rate of 64.4% in Dangassa and 45.2% in Nioro-du-Sahel (p = 0.025).

The Pfdhfr_51I-59R-108N pyrimethamine-resistance genotype was 14.1% and 19.6%, respectively in Dangassa and Nioro-du-Sahel. Mutations in the Pfdhps_S436-A437-K540-A581-613A sulfadoxine-resistance gene was significantly more prevalent in Dangassa as compared to Nioro-du-Sahel (p = 0.035). Up to 17.8% of the isolates from Dangassa vs 7% from Nioro-du-Sahel harboured at least two codon substitutions in this haplotype. The amodiaquine-resistance Pfmdr1_N86Y mutation was identified in only three samples (two in Dangassa and one in Nioro-du-Sahel).

CD4(EDU-2) Antibody

BNCA0345-250 250uL
EUR 383.00
Description: Primary antibody against CD4(EDU-2), APC conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC800345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF680 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC800345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF680 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCAP0345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), Alkaline Phosphatase conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCAP0345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), Alkaline Phosphatase conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNUM0345-50 50uL
EUR 395.00
Description: Primary antibody against CD4(EDU-2), 1mg/mL

CD4(EDU-2) Antibody

BNC040345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF405S conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC040345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF405S conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC050345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF405M conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC050345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF405M conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC400345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF640R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC400345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF640R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC430345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF543 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC430345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF543 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC700345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF770 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC940345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF594 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCH0345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), Horseradish Peroxidase conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCH0345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), Horseradish Peroxidase conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCP0345-250 250uL
EUR 383.00
Description: Primary antibody against CD4(EDU-2), PerCP conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCR0345-250 250uL
EUR 383.00
Description: Primary antibody against CD4(EDU-2), RPE conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC810345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF680R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC810345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF680R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCB0345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), Biotin conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNCB0345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), Biotin conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNUB0345-100 100uL
EUR 209.00
Description: Primary antibody against CD4(EDU-2), Concentration: 0.2mg/mL

CD4(EDU-2) Antibody

BNUB0345-500 500uL
EUR 458.00
Description: Primary antibody against CD4(EDU-2), Concentration: 0.2mg/mL

CD4(EDU-2) Antibody

BNC470345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF647 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC470345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF647 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC550345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF555 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC550345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF555 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC680345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF568 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC880345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF488A conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC880345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF488A conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC610345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF660R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC610345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF660R conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC700345-500 500uL
EUR 544.00
Description: Primary antibody against CD4(EDU-2), CF770 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC940345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF594 conjugate, Concentration: 0.1mg/mL

CD4(EDU-2) Antibody

BNC680345-100 100uL
EUR 199.00
Description: Primary antibody against CD4(EDU-2), CF568 conjugate, Concentration: 0.1mg/mL

Giemsa stain

20-abx082069
  • EUR 175.00
  • EUR 217.00
  • 1 g
  • 5 g
  • Shipped within 5-10 working days.

Giemsa stain

20-abx082518
  • EUR 175.00
  • EUR 217.00
  • 1 g
  • 5 g
  • Shipped within 5-10 working days.

Jenner's Stain

GT5545-100G 100 g
EUR 160.00

Jenner's Stain

GT5545-25G 25 g
EUR 81.00

Giemsa Stain

GT6821-100ML 100 ml
EUR 46.00

Giemsa Stain

GT6821-250ML 250 ml
EUR 59.00

Wright's stain

GT7819-100G 100 g
EUR 110.00

Wright's stain

GT7819-10G 10 g
EUR 46.00

Wright's stain

GT7819-250G 250 g
EUR 190.00

Wright's stain

GT7819-25G 25 g
EUR 58.00

Giemsa stain

GB0477 10g
EUR 60.44
  • Product category: Biochemicals/Indicators/Stains/Biological Stains

CytoSelect EdU Competitive ELISA Kit

CBA-5101 96 assays
EUR 543.00

Protein Stain-EZ C, Reversible Copper Stain Kit

BSP017 1kit, 10prep
EUR 74.36
  • Product category: Biochemicals/Indicators/Stains/Peptide/Protein Related

Protein Stain-EZ B, Reversible Zinc Stain Kit

BSP019 1kit, 10prep
EUR 74.36
  • Product category: Molecular Biology Kits/Protein - Staining

Protein Stain-EZG Rapid Coomassie Blue Stain Solution

BSP041 1KIT, 10prep
EUR 76.10
  • Product category: Molecular Biology Kits/Protein - Staining

Silver Stain kit

AR0171 1 kit (for 30 assays to stain the gel of 5 X8.5)
EUR 152.00

Copper Stain Kit

CSK-1 1 kit(s)
EUR 189.00

Copper Stain Kit

CSK-2 1 kit(s)
EUR 120.00

ClearSight DNA Stain

BH40501 1ml
EUR 103.00
Description: For DNA staining and vizualization.

ClearSight RNA Stain

BH40601 400µl
EUR 77.00
Description: For DNA staining and vizualization.

Pneumocystis Stain Kit

PCS-1 1 kit(s)
EUR 156.00

Pneumocystis Stain Kit

PCS-2 100 Slides
EUR 104.00

Reticulum Stain Kit

GRT-1 1 kit(s)
EUR 255.00

Reticulum Stain Kit

GRT-2 1 kit(s)
EUR 152.00

Gram Stain Kit

GSK-1 125 ml ea.
EUR 125.00

Gram Stain Kit

GSK-2 30 ml ea.
EUR 92.00

Gram Stain Kit

GSK-500 500 ml ea.
EUR 303.00

Jenner's Stain, certified

GT1148-25G 25 g
EUR 107.00

Giemsa stain, powder

GT7801-100G 100 g
EUR 134.00

Giemsa stain, powder

GT7801-10G 10 g
EUR 46.00

Giemsa stain, powder

GT7801-25G 25 g
EUR 62.00

Giemsa stain, powder

GT7801-50G 50 g
EUR 86.00

Giemsa stain, powder

GT7801-5G 5 g
EUR 42.00

Fite's Stain Kit

FLS-1 125 ml ea.
EUR 149.00

Fite's Stain Kit

FLS-500 500 ml ea.
EUR 295.00

Fite's Stain Kit

K1425-125
EUR 370.00

Geimsa Stain Kit

K1426-30
EUR 289.00

Geimsa Stain Kit

K1426-500
EUR 468.00

GMS Stain Kit

K1427-125
EUR 446.00

Gram Stain Kit

k1428-125
EUR 392.00

Gram Stain Kit

k1428-30
EUR 262.00

Orcein Stain Kit

K1432-125
EUR 501.00

Orcein Stain Kit

K1432-30
EUR 359.00

Pneumocystis Stain Kit

K1434-125
EUR 425.00

Pneumocystis Stain Kit

K1434-30
EUR 316.00

Steiner Stain Kit

K1435-125
EUR 446.00

Papanicolaou Stain Kit

K1440-30
EUR 207.00

Papanicolaou Stain Kit

K1440-500
EUR 278.00

GMS Stain Kit

KAA-1 125 ml ea.
EUR 216.00

GMS Stain Kit

KAA-1000 1000 ml ea.
EUR 884.00

GMS Stain Kit

KAA-500 500 ml ea.
EUR 523.00

Iron Stain Kit

IRN-1 1 kit(s)
EUR 149.00

Iron Stain Kit

IRN-2 100 Slides
EUR 101.00

4CN Stain Kit

PW024 5Preps, 5prep
EUR 70.88
  • Product category: Molecular Biology Kits/Protein - Staining

TMB Stain Kit

PW025 5Preps, 5prep
EUR 70.88
  • Product category: Molecular Biology Kits/Protein - Staining

Trichrome Stain (Blue)

TGB125 125 ml
EUR 74.00

Trichrome Stain (Blue)

TGB500 500 ml
EUR 116.00

Trichrome Stain (Blue)

TGB999 1000 ml
EUR 143.00

EdU (5-ethynyl-2'-deoxyuridine), 1 g

40540 1 g
EUR 435.00

EdU (5-ethynyl-2'-deoxyuridine), 250 mg

20540 250 mg
EUR 167.00

EdU (5-ethynyl-2'-deoxyuridine), 100 mg

10540 100 mg
EUR 112.00

EdU (5-ethynyl-2'-deoxyuridine), 500 mg

30540 500 mg
EUR 275.00

Protein Stain-EZ A Ultra Sensitive Coomassie Blue Stain Solution

SK3011 10Minigel, 10UNIT
EUR 66.53
  • Product category: Biochemicals/Indicators/Stains/Peptide/Protein Related

Colloidal Iron Stain Kit

CIK-1 1 kit(s)
EUR 156.00

Colloidal Iron Stain Kit

CIK-2 100 Slides
EUR 109.00

Bielshowsky's Stain Kit (Modified)

BSK-1 1 kit(s)
EUR 513.00

InstaBlue Protein Stain Solution

B8226-1000 1 L
EUR 108.00
Description: InstaBlue Protein Stain Solution is a ready to use Coomassie protein stain for polyacrylamide gels. Its unique patented mechanism of action stains proteins in 5 minutes while leaving a clear background without the need to fix, wash or destain.

InstaBlue Protein Stain Solution

B8226-500 500 ml
EUR 84.00
Description: InstaBlue Protein Stain Solution is a ready to use Coomassie protein stain for polyacrylamide gels. Its unique patented mechanism of action stains proteins in 5 minutes while leaving a clear background without the need to fix, wash or destain.

Papanicolaou (PAP) Stain Kit

PAP-1 500 ml ea.
EUR 125.00

Papanicolaou (PAP) Stain Kit

PAP-2 1 kit(s)
EUR 88.00

Papanicolaou (PAP) Stain Kit

PAP-3 1000 ml ea.
EUR 200.00

Giemsa stain, powder, certified

GT5290-100G 100 g
EUR 178.00

Giemsa stain, powder, certified

GT5290-10G 10 g
EUR 62.00

Giemsa stain, powder, certified

GT5290-25G 25 g
EUR 86.00

Giemsa stain, powder, certified

GT5290-50G 50 g
EUR 118.00

Giemsa stain, powder, certified

GT5290-5G 5 g
EUR 50.00

EvaGreenFluorescent DNA Stain (100µM)

F253 1 ml
EUR 121.00

EvaGreenFluorescent DNA Stain (100µM)

F253L 5x1 ml
EUR 484.00

Modified Gram Stain Kit

K1429-125
EUR 338.00

Modified Gram Stain Kit

K1429-30
EUR 251.00

Warthin-Starry Stain Kit

K1437-125
EUR 446.00

Wright-Giemsa Stain Kit

K1438-30
EUR 262.00

Wright-Giemsa Stain Kit

K1438-500
EUR 370.00

101Bio Ponceau S Stain

P5W4 NULL
EUR NULL

EA-50 Stain Solution

EAC3800 1 Gal.
EUR 183.00

EA-50 Stain Solution

EAC500 500 ml
EUR 88.00

EA-50 Stain Solution

EAC999 1000 ml
EUR 111.00

EA-65 Stain Solution

EAD3800 1 Gal.
EUR 154.00

EA-65 Stain Solution

EAD500 500 ml
EUR 84.00

EA-65 Stain Solution

EAD999 1000 ml
EUR 101.00

India Ink Stain Solution

PW006 100ml
EUR 74.36
  • Product category: Biochemicals/Indicators/Stains/Peptide/Protein Related

Sensitive DAB Stain Kit

PW023 5Preps, 5prep
EUR 69.14
  • Product category: Biochemicals/Indicators/Stains/Staining Kits

NBT/BCIP Stain Kit

PW032 5Preps, 5prep
EUR 70.88
  • Product category: Molecular Biology Kits/Protein - Staining

INT/BCIP Stain Kit

PW033 5Preps, 5prep
EUR 70.88
  • Product category: Molecular Biology Kits/Protein - Staining

Trichrome Stain Solution (Green)

TGG125 125 ml
EUR 88.00

Trichrome Stain Solution (Green)

TGG500 500 ml
EUR 116.00

Trichrome Stain Solution (Green)

TGG999 1000 ml
EUR 143.00

SensitiveSafe DNA Gel Stain

W139-500 NULL
EUR NULL

Wright-Giemsa Stain Kit

WGK-1 1 kit(s)
EUR 116.00

Wright-Giemsa Stain Kit

WGK-2 1 kit(s)
EUR 84.00

Warthin-Starry Stain Kit

WSS-1 1 kit(s)
EUR 183.00

Differentiating Solution (For Orcein Stain)

DSA125 125 ml
EUR 71.00

Differentiating Solution (For Orcein Stain)

DSA500 500 ml
EUR 122.00

Eco-Stain, ready to use

DT81413 1ml
EUR 102.20
  • Product category: Electrophoresis Related/Tracking Dyes

Alcian Blue - PAS Stain Kit

APS-1 1 kit(s)
EUR 205.00

Alcian Blue - PAS Stain Kit

APS-2 100 Slides
EUR 127.00

H. Pylori Rapid Stain Kit

AYH-1 1 kit(s)
EUR 215.00

H. Pylori Rapid Stain Kit

AYH-2 100 Slides
EUR 132.00

LipidSpot 488 Lipid Droplet Stain

70065 125uL
EUR 401.00
Description: Minimum order quantity: 1 unit of 125uL

LipidSpot 488 Lipid Droplet Stain

70065-T 20uL
EUR 116.00
Description: Minimum order quantity: 1 unit of 20uL

LipidSpot 610 Lipid Droplet Stain

70069 125uL
EUR 401.00
Description: Minimum order quantity: 1 unit of 125uL

LipidSpot 610 Lipid Droplet Stain

70069-T 20uL
EUR 114.00
Description: Minimum order quantity: 1 unit of 20uL

SYBR Safe DNA Gel Stain

A8743-.5 500 ul
EUR 119.00

SYBR Safe DNA Gel Stain

A8743-1 1 ml
EUR 161.00

SYBR Safe DNA Gel Stain

A8743-10 10x1 ml
EUR 699.00

SYBR Safe DNA Gel Stain

A8743-100 100x1 ml
EUR 3390.00

LUMITEIN PROTEIN GEL STAIN, 1X

21001 200mL
EUR 112.00
Description: Minimum order quantity: 1 unit of 200mL

LUMITEIN PROTEIN GEL STAIN, 1X

21001-1 1L
EUR 226.00
Description: Minimum order quantity: 1 unit of 1L

LUMITEIN PROTEIN GEL STAIN, 1X

21001-2 5L
EUR 802.00
Description: Minimum order quantity: 1 unit of 5L

LUMITEIN PROTEIN GEL STAIN, 100X

21002 2ML
EUR 96.00
Description: Minimum order quantity: 1 unit of 2ML

LUMITEIN PROTEIN GEL STAIN, 100X

21002-1 10ML
EUR 178.00
Description: Minimum order quantity: 1 unit of 10ML

LUMITEIN PROTEIN GEL STAIN, 100X

21002-2 50ML
EUR 634.00
Description: Minimum order quantity: 1 unit of 50ML

Maximo-Gel juice fluorescent stain

310012L 10x10 ml
EUR 1587.00

Amyloid Stain Kit (Congo Red)

AMY-1 1 kit(s)
EUR 165.00

Amyloid Stain Kit (Congo Red)

AMY-2 1 kit(s)
EUR 109.00

Eosinophil - Mast Cell Stain Kit

CEM-1 1 kit(s)
EUR 189.00

Eosinophil - Mast Cell Stain Kit

CEM-2 1 kit(s)
EUR 120.00

Hematoxylin and Eosin Stain Kit

HAE-1 1 kit(s)
EUR 125.00

Hematoxylin and Eosin Stain Kit

HAE-2 100 Slides
EUR 87.00

Giemsa Stain Kit (May-Grunwald)

GMG-1 1 kit(s)
EUR 173.00

Giemsa Stain Kit (May-Grunwald)

GMG-2 100 Slides
EUR 111.00

Reticulum Stain Kit (Modified Gomori's)

GRS-1 1 kit(s)
EUR 255.00

Reticulum Stain Kit (Modified Gomori's)

GRS-2 100 Slides
EUR 154.00

Elastic Stain Kit (Modified Verhoff's)

ETS-1 1 kit(s)
EUR 189.00

Elastic Stain Kit (Modified Verhoff's)

ETS-2 1 kit(s)
EUR 120.00

Exo-FITC Exosome FACS stain

EXOFLOW800A-1 20 reactions
EUR 241.00
  • Category: Exosomes

Exo-APC Exosome FACS stain

EXOFLOW810A-1 20 reactions
EUR 241.00
  • Category: Exosomes

Acid Fast Bacteria Stain Kit

K1424-125
EUR 338.00

Acid Fast Bacteria Stain Kit

K1424-30
EUR 272.00

Modified Southgate's Mucicarmine Stain Kit

K1430-125
EUR 425.00

Modified Southgate's Mucicarmine Stain Kit

K1430-30
EUR 316.00

The lumefantrine-reduced susceptibility Pfmdr1_Y184F mutation was found in 39.9% and 48.2% of samples in Dangassa and Nioro-du-Sahel, respectively. One piperaquine-resistance Exo_E415G mutation was found in Dangassa, while no artemisinin resistance genetic-background were identified. A high P. falciparum diversity was observed, but no clear genetic aggregation was found at either study sites.

Higher multiplicity of infection was observed in Dangassa with both COIL (p = 0.04) and Real McCOIL (p = 0.02) methods relative to Nioro-du-Sahel.This study reveals high prevalence of chloroquine and pyrimethamine-resistance markers as well as high codon substitution rate in the sulfadoxine-resistance gene. High genetic diversity of P. falciparum was observed. These observations suggest that the use of artemisinins is relevant in both Dangassa and Nioro-du-Sahel.